Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.4□□□□□ -0.42
Col6a4A2AX52 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.4□□□□□ -0.42
Col6a4A2AX52 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Dupd1-202ENSMUST00000224735 548 ntBASIC12.4□□□□□ -0.42
Col6a4A2AX52 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a4A2AX52 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a4A2AX52 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm8515-201ENSMUST00000194852 576 ntBASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.39□□□□□ -0.43
Col6a4A2AX52 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.39□□□□□ -0.43
Col6a4A2AX52 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a4A2AX52 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a4A2AX52 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Mir1897-201ENSMUST00000122581 272 ntBASIC12.38□□□□□ -0.43
Col6a4A2AX52 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms