Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gm16026-204ENSMUST00000162652 683 ntBASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gm17968-201ENSMUST00000194902 784 ntBASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gm45747-201ENSMUST00000212203 999 ntBASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6-4A0A075B6B4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav6-4A0A075B6B4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav6-4A0A075B6B4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Efs-202ENSMUST00000227037 2540 ntBASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6-4A0A075B6B4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-4A0A075B6B4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms