Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Gm13464-201ENSMUST00000119418 935 ntBASIC14.38□□□□□ -0.11
Cdh17Q9R100 Mir8098-201ENSMUST00000184011 137 ntBASIC14.38□□□□□ -0.11
Cdh17Q9R100 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.38□□□□□ -0.11
Cdh17Q9R100 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.38□□□□□ -0.11
Cdh17Q9R100 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.38□□□□□ -0.11
Cdh17Q9R100 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.38□□□□□ -0.11
Cdh17Q9R100 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdh17Q9R100 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.37□□□□□ -0.11
Cdh17Q9R100 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.37□□□□□ -0.11
Cdh17Q9R100 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.37□□□□□ -0.11
Cdh17Q9R100 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Gm9726-201ENSMUST00000180321 678 ntBASIC14.37□□□□□ -0.11
Cdh17Q9R100 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.37□□□□□ -0.11
Cdh17Q9R100 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.37□□□□□ -0.11
Cdh17Q9R100 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh17Q9R100 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms