Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Gm2810-201ENSMUST00000118681 990 ntBASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Gm23547-201ENSMUST00000158210 271 ntBASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Gm18737-201ENSMUST00000173594 937 ntBASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Gm37230-201ENSMUST00000194491 818 ntBASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Gm18889-201ENSMUST00000174284 929 ntBASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Gm9182-201ENSMUST00000217829 639 ntBASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk3aQ9JKX8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Gm27702-201ENSMUST00000184512 56 ntBASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Chchd1-203ENSMUST00000224633 557 ntBASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3aQ9JKX8 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms