Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2aQ9DB34 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2aQ9DB34 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm15427-201ENSMUST00000117288 531 ntBASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm27397-201ENSMUST00000184997 107 ntBASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm37935-201ENSMUST00000192012 982 ntBASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Chmp2aQ9DB34 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Gm24513-201ENSMUST00000174964 138 ntBASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Gm2272-201ENSMUST00000194903 582 ntBASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2aQ9DB34 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms