Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim13Q9CYB0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Carlr-201ENSMUST00000181515 2574 ntBASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trim13Q9CYB0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Olfr129-201ENSMUST00000122318 993 ntBASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Gm23547-201ENSMUST00000158210 271 ntBASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Gm25745-201ENSMUST00000174945 133 ntBASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Gm8318-201ENSMUST00000182954 872 ntBASIC13.65□□□□□ -0.22
Trim13Q9CYB0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.65□□□□□ -0.22
Trim13Q9CYB0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim13Q9CYB0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim13Q9CYB0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms