Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Gm7222-201ENSMUST00000117512 906 ntBASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Gm23547-201ENSMUST00000158210 271 ntBASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Gm27628-201ENSMUST00000184911 107 ntBASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf135Q9CWS1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm23935-201ENSMUST00000102303 57 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm24270-201ENSMUST00000102326 57 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm14822-201ENSMUST00000122247 291 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm24245-201ENSMUST00000157318 57 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.36■□□□□ 0.05
Rnf135Q9CWS1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Gm45167-201ENSMUST00000208007 322 ntBASIC15.35■□□□□ 0.05
Rnf135Q9CWS1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms