Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pfdn1Q9CWM4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pfdn1Q9CWM4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pfdn1Q9CWM4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Gm18421-201ENSMUST00000204122 625 ntBASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn1Q9CWM4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn1Q9CWM4 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gm12896-201ENSMUST00000118430 226 ntBASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gm12085-201ENSMUST00000119263 940 ntBASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gm44450-201ENSMUST00000199528 114 ntBASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn1Q9CWM4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms