Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Mir6420-201ENSMUST00000185032 102 ntBASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Dupd1-202ENSMUST00000224735 548 ntBASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx6-1Q99MA9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx6-1Q99MA9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Gm43630-201ENSMUST00000201550 776 ntBASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms