Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.09□□□□□ -0.15
Nck1Q99M51 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.09□□□□□ -0.15
Nck1Q99M51 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nck1Q99M51 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.09□□□□□ -0.15
Nck1Q99M51 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nck1Q99M51 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nck1Q99M51 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nck1Q99M51 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.08□□□□□ -0.15
Nck1Q99M51 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.08□□□□□ -0.15
Nck1Q99M51 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
Nck1Q99M51 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nck1Q99M51 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Nck1Q99M51 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nck1Q99M51 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nck1Q99M51 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nck1Q99M51 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nck1Q99M51 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.08□□□□□ -0.16
Nck1Q99M51 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.08□□□□□ -0.16
Nck1Q99M51 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.08□□□□□ -0.16
Nck1Q99M51 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.08□□□□□ -0.16
Nck1Q99M51 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.08□□□□□ -0.16
Nck1Q99M51 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nck1Q99M51 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.08□□□□□ -0.16
Nck1Q99M51 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.08□□□□□ -0.16
Nck1Q99M51 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nck1Q99M51 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.07□□□□□ -0.16
Nck1Q99M51 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.07□□□□□ -0.16
Nck1Q99M51 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.07□□□□□ -0.16
Nck1Q99M51 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.07□□□□□ -0.16
Nck1Q99M51 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nck1Q99M51 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nck1Q99M51 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nck1Q99M51 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nck1Q99M51 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nck1Q99M51 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nck1Q99M51 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nck1Q99M51 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nck1Q99M51 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nck1Q99M51 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms