Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc5Q91XW9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.83■□□□□ 0.29
Pcdhgc5Q91XW9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Gm17837-201ENSMUST00000186435 985 ntBASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.83■□□□□ 0.28
Pcdhgc5Q91XW9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Gm6415-201ENSMUST00000118488 348 ntBASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc5Q91XW9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Gm27989-201ENSMUST00000184721 107 ntBASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc5Q91XW9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms