Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kdm4cQ8VCD7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kdm4cQ8VCD7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Kdm4cQ8VCD7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kdm4cQ8VCD7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kdm4cQ8VCD7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kdm4cQ8VCD7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Olfr286-202ENSMUST00000205305 969 ntBASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kdm4cQ8VCD7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kdm4cQ8VCD7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Gm18669-201ENSMUST00000216049 778 ntBASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Gm7787-201ENSMUST00000216858 688 ntBASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.33■□□□□ 0.36
Kdm4cQ8VCD7 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Kdm4cQ8VCD7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms