Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Gm6973-201ENSMUST00000117080 721 ntBASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Gm16026-204ENSMUST00000162652 683 ntBASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Gm25948-201ENSMUST00000175334 112 ntBASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ndc1Q8VCB1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ndc1Q8VCB1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ndc1Q8VCB1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms