Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Gm6550-201ENSMUST00000187574 993 ntBASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox30Q8CGW4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gm28033-201ENSMUST00000184224 96 ntBASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gm27459-201ENSMUST00000184860 107 ntBASIC16.11■□□□□ 0.17
Sox30Q8CGW4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gm2272-201ENSMUST00000194903 582 ntBASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox30Q8CGW4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.1■□□□□ 0.17
Sox30Q8CGW4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms