Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm18489-201ENSMUST00000172565 551 ntBASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ppp1r3eQ8BRJ4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm27525-201ENSMUST00000184465 107 ntBASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ppp1r3eQ8BRJ4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm37935-201ENSMUST00000192012 982 ntBASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ppp1r3eQ8BRJ4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ppp1r3eQ8BRJ4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms