Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Gm44430-201ENSMUST00000203376 995 ntBASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Smndc1Q8BGT7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Rprl3-201ENSMUST00000157400 290 ntBASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Gm34391-201ENSMUST00000203706 907 ntBASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smndc1Q8BGT7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smndc1Q8BGT7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Gm28659-201ENSMUST00000188013 759 ntBASIC14.34□□□□□ -0.11
Smndc1Q8BGT7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms