Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.04□□□□□ -0.48
Vma21Q78T54 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vma21Q78T54 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.03□□□□□ -0.48
Vma21Q78T54 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.03□□□□□ -0.48
Vma21Q78T54 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.03□□□□□ -0.48
Vma21Q78T54 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Vma21Q78T54 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vma21Q78T54 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vma21Q78T54 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vma21Q78T54 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.02□□□□□ -0.49
Vma21Q78T54 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Gm37153-201ENSMUST00000193637 231 ntBASIC12.02□□□□□ -0.49
Vma21Q78T54 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.02□□□□□ -0.49
Vma21Q78T54 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.02□□□□□ -0.49
Vma21Q78T54 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vma21Q78T54 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vma21Q78T54 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Carlr-201ENSMUST00000181515 2574 ntBASIC12.01□□□□□ -0.49
Vma21Q78T54 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms