Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Dhx40Q6PE54 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm13418-201ENSMUST00000119097 944 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44357-201ENSMUST00000195897 142 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm19658-201ENSMUST00000196231 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44367-201ENSMUST00000196836 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44350-201ENSMUST00000197197 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44390-201ENSMUST00000197533 144 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44313-201ENSMUST00000198018 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44486-201ENSMUST00000198508 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44314-201ENSMUST00000199263 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44394-201ENSMUST00000199558 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44484-201ENSMUST00000199873 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44466-201ENSMUST00000200264 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Gm44359-201ENSMUST00000200671 138 ntBASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dhx40Q6PE54 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Mzt1-203ENSMUST00000227948 952 ntBASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Dhx40Q6PE54 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Gm37153-201ENSMUST00000193637 231 ntBASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dhx40Q6PE54 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Dhx40Q6PE54 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms