Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Gm18489-201ENSMUST00000172565 551 ntBASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd3Q6P9Z1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd3Q6P9Z1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Gm13418-201ENSMUST00000119097 944 ntBASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Gm28033-201ENSMUST00000184224 96 ntBASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms