Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Gm16198-201ENSMUST00000118766 670 ntBASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.95□□□□□ -0.02
Casc4Q6P2L7 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.95□□□□□ -0.02
Casc4Q6P2L7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Casc4Q6P2L7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Gm9385-201ENSMUST00000117563 472 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Gm2213-201ENSMUST00000197485 688 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Efs-202ENSMUST00000227037 2540 ntBASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Casc4Q6P2L7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Casc4Q6P2L7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms