Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm23935-201ENSMUST00000102303 57 ntBASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Gm24270-201ENSMUST00000102326 57 ntBASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Gm24245-201ENSMUST00000157318 57 ntBASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Gm23547-201ENSMUST00000158210 271 ntBASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf1Q69ZI1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf1Q69ZI1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf1Q69ZI1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.96□□□□□ -0.02
Sh3rf1Q69ZI1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sh3rf1Q69ZI1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Sh3rf1Q69ZI1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.96□□□□□ -0.02
Sh3rf1Q69ZI1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sh3rf1Q69ZI1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms