Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.2□□□□□ -0.14
Sdc3Q64519 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Rpph1-201ENSMUST00000175096 319 ntBASIC14.2□□□□□ -0.14
Sdc3Q64519 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.2□□□□□ -0.14
Sdc3Q64519 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Sdc3Q64519 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc3Q64519 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Mir1895-201ENSMUST00000122615 79 ntBASIC14.19□□□□□ -0.14
Sdc3Q64519 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Gm44335-201ENSMUST00000196879 141 ntBASIC14.19□□□□□ -0.14
Sdc3Q64519 Gm44297-201ENSMUST00000198304 141 ntBASIC14.19□□□□□ -0.14
Sdc3Q64519 Gm44346-201ENSMUST00000198851 141 ntBASIC14.19□□□□□ -0.14
Sdc3Q64519 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sdc3Q64519 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc3Q64519 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.18□□□□□ -0.14
Sdc3Q64519 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.18□□□□□ -0.14
Sdc3Q64519 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.18□□□□□ -0.14
Sdc3Q64519 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sdc3Q64519 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc3Q64519 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc3Q64519 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sdc3Q64519 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms