Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xrcc1Q60596 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.11□□□□□ -0.15
Xrcc1Q60596 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm11745-201ENSMUST00000121669 448 ntBASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xrcc1Q60596 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm6973-201ENSMUST00000117080 721 ntBASIC14.1□□□□□ -0.15
Xrcc1Q60596 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm18057-201ENSMUST00000208220 503 ntBASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Xrcc1Q60596 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.09□□□□□ -0.15
Xrcc1Q60596 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.09□□□□□ -0.15
Xrcc1Q60596 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Gm15483-201ENSMUST00000120338 456 ntBASIC14.09□□□□□ -0.15
Xrcc1Q60596 Rprl2-201ENSMUST00000157150 290 ntBASIC14.09□□□□□ -0.15
Xrcc1Q60596 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.09□□□□□ -0.15
Xrcc1Q60596 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.09□□□□□ -0.15
Xrcc1Q60596 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms