Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6-3Q5R1E6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6-3Q5R1E6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-3Q5R1E6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6-3Q5R1E6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6-3Q5R1E6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6-3Q5R1E6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-3Q5R1E6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms