Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv4Q5R1A3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trdv4Q5R1A3 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Gm14140-201ENSMUST00000119999 995 ntBASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Psmb5-202ENSMUST00000227257 622 ntBASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trdv4Q5R1A3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv4Q5R1A3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms