Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Sybu-209ENSMUST00000228639 4113 ntBASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rc3h1Q4VGL6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Gm9726-201ENSMUST00000180321 678 ntBASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Gm15823-201ENSMUST00000064305 670 ntBASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Efs-202ENSMUST00000227037 2540 ntBASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rc3h1Q4VGL6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Gm27306-201ENSMUST00000183970 107 ntBASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Gm37230-201ENSMUST00000194491 818 ntBASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rc3h1Q4VGL6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms