Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc190Q3URK1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13□□□□□ -0.33
Ccdc190Q3URK1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Gm8784-201ENSMUST00000222096 1435 ntBASIC13□□□□□ -0.33
Ccdc190Q3URK1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc190Q3URK1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc190Q3URK1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms