Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Naf1Q3UMQ8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Naf1Q3UMQ8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Naf1Q3UMQ8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gm38294-201ENSMUST00000192831 381 ntBASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gm20949-201ENSMUST00000206478 952 ntBASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Naf1Q3UMQ8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms