Protein–RNA interactions for Protein: Q3UA16

Spc25, Kinetochore protein Spc25, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spc25Q3UA16 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Spc25Q3UA16 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.49□□□□□ -0.25
Spc25Q3UA16 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spc25Q3UA16 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm12134-201ENSMUST00000122109 520 ntBASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm10060-201ENSMUST00000212002 111 ntBASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm7787-201ENSMUST00000216858 688 ntBASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spc25Q3UA16 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spc25Q3UA16 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms