Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Vars2Q3U2A8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Gm11524-201ENSMUST00000119349 807 ntBASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Gm29199-201ENSMUST00000187766 775 ntBASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Gm9823-201ENSMUST00000051212 327 ntBASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vars2Q3U2A8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Gm7783-201ENSMUST00000204795 781 ntBASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Gm18905-201ENSMUST00000205454 928 ntBASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vars2Q3U2A8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gm13612-201ENSMUST00000119276 390 ntBASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gm16177-201ENSMUST00000120728 718 ntBASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gm38266-201ENSMUST00000194931 421 ntBASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vars2Q3U2A8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Vars2Q3U2A8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vars2Q3U2A8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.08■□□□□ 0.48
Vars2Q3U2A8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vars2Q3U2A8 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.08■□□□□ 0.48
Vars2Q3U2A8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms