Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gm18195-201ENSMUST00000207604 706 ntBASIC15.66■□□□□ 0.1
Trim43aQ3TL54 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trim43aQ3TL54 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Gm6296-201ENSMUST00000222599 943 ntBASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Rps4l-201ENSMUST00000071745 943 ntBASIC15.65■□□□□ 0.1
Trim43aQ3TL54 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43aQ3TL54 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim43aQ3TL54 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43aQ3TL54 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43aQ3TL54 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43aQ3TL54 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43aQ3TL54 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim43aQ3TL54 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43aQ3TL54 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms