Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.96□□□□□ -0.01
Ebf1Q07802 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Gm13453-201ENSMUST00000118708 357 ntBASIC14.96□□□□□ -0.01
Ebf1Q07802 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Mir7684-201ENSMUST00000183858 60 ntBASIC14.96□□□□□ -0.01
Ebf1Q07802 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf1Q07802 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ebf1Q07802 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf1Q07802 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf1Q07802 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf1Q07802 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf1Q07802 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf1Q07802 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Gm27989-201ENSMUST00000184721 107 ntBASIC14.95□□□□□ -0.02
Ebf1Q07802 Gm17837-201ENSMUST00000186435 985 ntBASIC14.95□□□□□ -0.02
Ebf1Q07802 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Ebf1Q07802 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf1Q07802 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.94□□□□□ -0.02
Ebf1Q07802 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 BC037039-201ENSMUST00000192003 2205 ntBASIC14.94□□□□□ -0.02
Ebf1Q07802 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ebf1Q07802 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf1Q07802 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms