Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm9385-201ENSMUST00000117563 472 ntBASIC12.96□□□□□ -0.33
Thbs3Q05895 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.96□□□□□ -0.33
Thbs3Q05895 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.96□□□□□ -0.33
Thbs3Q05895 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Thbs3Q05895 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thbs3Q05895 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.96□□□□□ -0.34
Thbs3Q05895 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.96□□□□□ -0.34
Thbs3Q05895 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thbs3Q05895 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thbs3Q05895 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.96□□□□□ -0.34
Thbs3Q05895 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.96□□□□□ -0.34
Thbs3Q05895 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Thbs3Q05895 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thbs3Q05895 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thbs3Q05895 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Thbs3Q05895 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thbs3Q05895 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.95□□□□□ -0.34
Thbs3Q05895 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm8749-201ENSMUST00000117737 331 ntBASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.95□□□□□ -0.34
Thbs3Q05895 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.95□□□□□ -0.34
Thbs3Q05895 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.95□□□□□ -0.34
Thbs3Q05895 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.95□□□□□ -0.34
Thbs3Q05895 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Thbs3Q05895 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Thbs3Q05895 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Thbs3Q05895 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Thbs3Q05895 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thbs3Q05895 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.95□□□□□ -0.34
Thbs3Q05895 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Thbs3Q05895 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Thbs3Q05895 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.94□□□□□ -0.34
Thbs3Q05895 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.94□□□□□ -0.34
Thbs3Q05895 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Thbs3Q05895 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.94□□□□□ -0.34
Thbs3Q05895 Gm9726-201ENSMUST00000180321 678 ntBASIC12.94□□□□□ -0.34
Thbs3Q05895 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.94□□□□□ -0.34
Thbs3Q05895 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.94□□□□□ -0.34
Thbs3Q05895 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Gm10175-201ENSMUST00000086013 645 ntBASIC12.94□□□□□ -0.34
Thbs3Q05895 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Thbs3Q05895 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs3Q05895 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms