Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.68□□□□□ -0.38
Smn1P97801 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.68□□□□□ -0.38
Smn1P97801 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smn1P97801 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Smn1P97801 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Smn1P97801 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Smn1P97801 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Gm43767-201ENSMUST00000198933 381 ntBASIC12.67□□□□□ -0.38
Smn1P97801 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.67□□□□□ -0.38
Smn1P97801 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.67□□□□□ -0.38
Smn1P97801 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.67□□□□□ -0.38
Smn1P97801 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Smn1P97801 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smn1P97801 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Smn1P97801 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smn1P97801 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.66□□□□□ -0.38
Smn1P97801 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.66□□□□□ -0.38
Smn1P97801 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.66□□□□□ -0.38
Smn1P97801 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.66□□□□□ -0.38
Smn1P97801 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smn1P97801 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smn1P97801 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.66□□□□□ -0.38
Smn1P97801 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Smn1P97801 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.66□□□□□ -0.38
Smn1P97801 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.66□□□□□ -0.38
Smn1P97801 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smn1P97801 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.65□□□□□ -0.38
Smn1P97801 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.65□□□□□ -0.38
Smn1P97801 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms