Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Rps28P62858 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Matn2-203ENSMUST00000226766 3252 ntBASIC8.67□□□□□ -1.02
Rps28P62858 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rps28P62858 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rps28P62858 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.66□□□□□ -1.02
Rps28P62858 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.66□□□□□ -1.02
Rps28P62858 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.66□□□□□ -1.02
Rps28P62858 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC8.66□□□□□ -1.02
Rps28P62858 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Gm7860-201ENSMUST00000121190 879 ntBASIC8.66□□□□□ -1.02
Rps28P62858 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rps28P62858 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rps28P62858 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Gm28386-201ENSMUST00000189147 1849 ntBASIC8.66□□□□□ -1.02
Rps28P62858 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rps28P62858 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC8.65□□□□□ -1.02
Rps28P62858 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Rps28P62858 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC8.65□□□□□ -1.02
Rps28P62858 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rps28P62858 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rps28P62858 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC8.65□□□□□ -1.02
Rps28P62858 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rps28P62858 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rps28P62858 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Rps28P62858 Gm26616-202ENSMUST00000195676 3107 ntBASIC8.65□□□□□ -1.03
Rps28P62858 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Rps28P62858 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC8.65□□□□□ -1.03
Rps28P62858 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rps28P62858 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms