Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp20P57748 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Mmp20P57748 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.8■□□□□ 0.28
Mmp20P57748 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp20P57748 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.8■□□□□ 0.28
Mmp20P57748 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.8■□□□□ 0.28
Mmp20P57748 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.8■□□□□ 0.28
Mmp20P57748 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.8■□□□□ 0.28
Mmp20P57748 Gm18624-201ENSMUST00000220966 658 ntBASIC16.8■□□□□ 0.28
Mmp20P57748 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.8■□□□□ 0.28
Mmp20P57748 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Mmp20P57748 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.8■□□□□ 0.28
Mmp20P57748 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp20P57748 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mmp20P57748 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.79■□□□□ 0.28
Mmp20P57748 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.79■□□□□ 0.28
Mmp20P57748 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Mmp20P57748 Gm8602-201ENSMUST00000184045 607 ntBASIC16.79■□□□□ 0.28
Mmp20P57748 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.79■□□□□ 0.28
Mmp20P57748 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.79■□□□□ 0.28
Mmp20P57748 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.79■□□□□ 0.28
Mmp20P57748 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mmp20P57748 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp20P57748 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.79■□□□□ 0.28
Mmp20P57748 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Mmp20P57748 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mmp20P57748 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.78■□□□□ 0.28
Mmp20P57748 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.78■□□□□ 0.28
Mmp20P57748 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.78■□□□□ 0.28
Mmp20P57748 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Gm6916-202ENSMUST00000205523 195 ntBASIC16.78■□□□□ 0.28
Mmp20P57748 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp20P57748 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.78■□□□□ 0.28
Mmp20P57748 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Mmp20P57748 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mmp20P57748 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp20P57748 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.77■□□□□ 0.28
Mmp20P57748 BC001981-202ENSMUST00000191393 1545 ntBASIC16.77■□□□□ 0.28
Mmp20P57748 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.77■□□□□ 0.28
Mmp20P57748 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Mmp20P57748 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.77■□□□□ 0.28
Mmp20P57748 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Mmp20P57748 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp20P57748 Mir6392-201ENSMUST00000184924 108 ntBASIC16.77■□□□□ 0.28
Mmp20P57748 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.77■□□□□ 0.28
Mmp20P57748 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms