Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sssca1P56873 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.95□□□□□ -0.5
Sssca1P56873 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sssca1P56873 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sssca1P56873 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sssca1P56873 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sssca1P56873 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.95□□□□□ -0.5
Sssca1P56873 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.95□□□□□ -0.5
Sssca1P56873 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.95□□□□□ -0.5
Sssca1P56873 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Sssca1P56873 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sssca1P56873 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sssca1P56873 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sssca1P56873 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.94□□□□□ -0.5
Sssca1P56873 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.94□□□□□ -0.5
Sssca1P56873 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sssca1P56873 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Sssca1P56873 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sssca1P56873 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.94□□□□□ -0.5
Sssca1P56873 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sssca1P56873 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sssca1P56873 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sssca1P56873 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.93□□□□□ -0.5
Sssca1P56873 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Acot6-202ENSMUST00000222921 3622 ntBASIC11.93□□□□□ -0.5
Sssca1P56873 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sssca1P56873 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sssca1P56873 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms