Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sox1P53783 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15□□□□□ -0.01
Sox1P53783 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15□□□□□ -0.01
Sox1P53783 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox1P53783 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox1P53783 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.99□□□□□ -0.01
Sox1P53783 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox1P53783 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.99□□□□□ -0.01
Sox1P53783 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.99□□□□□ -0.01
Sox1P53783 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.99□□□□□ -0.01
Sox1P53783 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox1P53783 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.99□□□□□ -0.01
Sox1P53783 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox1P53783 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.99□□□□□ -0.01
Sox1P53783 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox1P53783 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox1P53783 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.99□□□□□ -0.01
Sox1P53783 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Sox1P53783 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sox1P53783 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox1P53783 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sox1P53783 Gm11814-201ENSMUST00000119515 929 ntBASIC14.98□□□□□ -0.01
Sox1P53783 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox1P53783 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Gm27516-201ENSMUST00000184237 98 ntBASIC14.98□□□□□ -0.01
Sox1P53783 Gm2495-201ENSMUST00000191160 466 ntBASIC14.98□□□□□ -0.01
Sox1P53783 Gm3961-201ENSMUST00000204425 994 ntBASIC14.98□□□□□ -0.01
Sox1P53783 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Sox1P53783 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox1P53783 Gm45930-201ENSMUST00000221330 292 ntBASIC14.98□□□□□ -0.01
Sox1P53783 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox1P53783 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox1P53783 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Sox1P53783 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Sox1P53783 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox1P53783 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox1P53783 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.97□□□□□ -0.01
Sox1P53783 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox1P53783 Gm27514-201ENSMUST00000183692 110 ntBASIC14.97□□□□□ -0.01
Sox1P53783 Gm7783-201ENSMUST00000204795 781 ntBASIC14.97□□□□□ -0.01
Sox1P53783 Gm45880-201ENSMUST00000213041 853 ntBASIC14.97□□□□□ -0.01
Sox1P53783 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox1P53783 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox1P53783 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms