Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pdx1P52946 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.6□□□□□ -0.07
Pdx1P52946 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pdx1P52946 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pdx1P52946 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
Pdx1P52946 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.59□□□□□ -0.07
Pdx1P52946 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.59□□□□□ -0.07
Pdx1P52946 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdx1P52946 Gm15483-201ENSMUST00000120338 456 ntBASIC14.59□□□□□ -0.07
Pdx1P52946 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
Pdx1P52946 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.59□□□□□ -0.07
Pdx1P52946 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.59□□□□□ -0.07
Pdx1P52946 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pdx1P52946 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdx1P52946 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdx1P52946 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Pdx1P52946 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdx1P52946 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdx1P52946 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pdx1P52946 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Gm13464-201ENSMUST00000119418 935 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdx1P52946 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.58□□□□□ -0.08
Pdx1P52946 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pdx1P52946 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pdx1P52946 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Pdx1P52946 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pdx1P52946 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pdx1P52946 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pdx1P52946 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.58□□□□□ -0.08
Pdx1P52946 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdx1P52946 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Pdx1P52946 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pdx1P52946 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms