Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CntfP51642 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CntfP51642 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.85□□□□□ -0.19
CntfP51642 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.85□□□□□ -0.19
CntfP51642 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.85□□□□□ -0.19
CntfP51642 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.85□□□□□ -0.19
CntfP51642 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.85□□□□□ -0.19
CntfP51642 Gm27459-201ENSMUST00000184860 107 ntBASIC13.85□□□□□ -0.19
CntfP51642 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.85□□□□□ -0.19
CntfP51642 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.85□□□□□ -0.19
CntfP51642 Gm37153-201ENSMUST00000193637 231 ntBASIC13.85□□□□□ -0.19
CntfP51642 Gm34391-201ENSMUST00000203706 907 ntBASIC13.85□□□□□ -0.19
CntfP51642 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.85□□□□□ -0.19
CntfP51642 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CntfP51642 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CntfP51642 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CntfP51642 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CntfP51642 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.84□□□□□ -0.19
CntfP51642 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CntfP51642 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CntfP51642 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CntfP51642 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CntfP51642 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CntfP51642 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CntfP51642 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CntfP51642 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CntfP51642 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.83□□□□□ -0.2
CntfP51642 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Gm7222-201ENSMUST00000117512 906 ntBASIC13.83□□□□□ -0.2
CntfP51642 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.83□□□□□ -0.2
CntfP51642 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.83□□□□□ -0.2
CntfP51642 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.83□□□□□ -0.2
CntfP51642 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.83□□□□□ -0.2
CntfP51642 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
CntfP51642 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CntfP51642 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.83□□□□□ -0.2
CntfP51642 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CntfP51642 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.83□□□□□ -0.2
CntfP51642 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CntfP51642 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CntfP51642 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CntfP51642 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CntfP51642 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CntfP51642 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CntfP51642 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms