Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.14■□□□□ 0.01
TubP50586 Mir1895-201ENSMUST00000122615 79 ntBASIC15.14■□□□□ 0.01
TubP50586 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.14■□□□□ 0.01
TubP50586 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
TubP50586 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TubP50586 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
TubP50586 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.14■□□□□ 0.01
TubP50586 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.13■□□□□ 0.01
TubP50586 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TubP50586 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.13■□□□□ 0.01
TubP50586 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TubP50586 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Gm11745-201ENSMUST00000121669 448 ntBASIC15.13■□□□□ 0.01
TubP50586 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.13■□□□□ 0.01
TubP50586 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.13■□□□□ 0.01
TubP50586 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Gm43575-201ENSMUST00000196420 516 ntBASIC15.13■□□□□ 0.01
TubP50586 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.13■□□□□ 0.01
TubP50586 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TubP50586 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TubP50586 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TubP50586 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.13■□□□□ 0.01
TubP50586 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TubP50586 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TubP50586 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.12■□□□□ 0.01
TubP50586 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TubP50586 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.12■□□□□ 0.01
TubP50586 Gm6973-201ENSMUST00000117080 721 ntBASIC15.12■□□□□ 0.01
TubP50586 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.12■□□□□ 0.01
TubP50586 Gm13365-201ENSMUST00000121188 973 ntBASIC15.12■□□□□ 0.01
TubP50586 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.12■□□□□ 0.01
TubP50586 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
TubP50586 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TubP50586 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.12■□□□□ 0.01
TubP50586 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.12■□□□□ 0.01
TubP50586 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.12■□□□□ 0.01
TubP50586 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TubP50586 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TubP50586 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TubP50586 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.11■□□□□ 0.01
TubP50586 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.11■□□□□ 0.01
TubP50586 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.11■□□□□ 0.01
TubP50586 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.11■□□□□ 0.01
TubP50586 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TubP50586 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TubP50586 Gm13464-201ENSMUST00000119418 935 ntBASIC15.11■□□□□ 0.01
TubP50586 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms