Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.2□□□□□ -0.14
Prox1P48437 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.2□□□□□ -0.14
Prox1P48437 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Prox1P48437 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Prox1P48437 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Prox1P48437 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Prox1P48437 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.2□□□□□ -0.14
Prox1P48437 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.2□□□□□ -0.14
Prox1P48437 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Prox1P48437 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Prox1P48437 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prox1P48437 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prox1P48437 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Prox1P48437 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prox1P48437 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.19□□□□□ -0.14
Prox1P48437 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prox1P48437 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.19□□□□□ -0.14
Prox1P48437 Grk6-207ENSMUST00000225925 2769 ntBASIC14.18□□□□□ -0.14
Prox1P48437 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prox1P48437 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prox1P48437 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Prox1P48437 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.18□□□□□ -0.14
Prox1P48437 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Prox1P48437 Gm17971-201ENSMUST00000190239 806 ntBASIC14.18□□□□□ -0.14
Prox1P48437 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.18□□□□□ -0.14
Prox1P48437 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.18□□□□□ -0.14
Prox1P48437 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Prox1P48437 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Gm18669-201ENSMUST00000216049 778 ntBASIC14.18□□□□□ -0.14
Prox1P48437 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Prox1P48437 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prox1P48437 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prox1P48437 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prox1P48437 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms