Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hist1h1aP43275 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist1h1aP43275 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.22□□□□□ -0.45
Hist1h1aP43275 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist1h1aP43275 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist1h1aP43275 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hist1h1aP43275 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist1h1aP43275 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist1h1aP43275 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.2□□□□□ -0.46
Hist1h1aP43275 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist1h1aP43275 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.19□□□□□ -0.46
Hist1h1aP43275 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Gm17807-201ENSMUST00000186869 298 ntBASIC12.19□□□□□ -0.46
Hist1h1aP43275 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms