Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Hmx3P42581 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.36□□□□□ -0.43
Hmx3P42581 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmx3P42581 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmx3P42581 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.35□□□□□ -0.43
Hmx3P42581 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Hmx3P42581 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmx3P42581 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmx3P42581 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmx3P42581 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmx3P42581 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Gm27742-201ENSMUST00000184667 60 ntBASIC12.35□□□□□ -0.43
Hmx3P42581 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.35□□□□□ -0.43
Hmx3P42581 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmx3P42581 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.35□□□□□ -0.43
Hmx3P42581 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmx3P42581 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmx3P42581 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hmx3P42581 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Hmx3P42581 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hmx3P42581 Gm13312-201ENSMUST00000119631 718 ntBASIC12.34□□□□□ -0.43
Hmx3P42581 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmx3P42581 Gm7284-201ENSMUST00000131667 944 ntBASIC12.34□□□□□ -0.43
Hmx3P42581 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Hmx3P42581 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmx3P42581 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Hmx3P42581 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmx3P42581 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms