Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cd27P41272 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.82□□□□□ -0.52
Cd27P41272 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cd27P41272 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.82□□□□□ -0.52
Cd27P41272 Gm13365-201ENSMUST00000121188 973 ntBASIC11.82□□□□□ -0.52
Cd27P41272 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.82□□□□□ -0.52
Cd27P41272 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cd27P41272 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd27P41272 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.82□□□□□ -0.52
Cd27P41272 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.82□□□□□ -0.52
Cd27P41272 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.82□□□□□ -0.52
Cd27P41272 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cd27P41272 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cd27P41272 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd27P41272 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cd27P41272 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.81□□□□□ -0.52
Cd27P41272 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cd27P41272 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Olfr286-202ENSMUST00000205305 969 ntBASIC11.81□□□□□ -0.52
Cd27P41272 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.81□□□□□ -0.52
Cd27P41272 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Cd27P41272 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.81□□□□□ -0.52
Cd27P41272 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cd27P41272 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.81□□□□□ -0.52
Cd27P41272 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd27P41272 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd27P41272 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.8□□□□□ -0.52
Cd27P41272 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd27P41272 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd27P41272 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd27P41272 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd27P41272 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd27P41272 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.8□□□□□ -0.52
Cd27P41272 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.8□□□□□ -0.52
Cd27P41272 Gm24513-201ENSMUST00000174964 138 ntBASIC11.8□□□□□ -0.52
Cd27P41272 Gm9726-201ENSMUST00000180321 678 ntBASIC11.8□□□□□ -0.52
Cd27P41272 Gm27920-201ENSMUST00000183953 96 ntBASIC11.8□□□□□ -0.52
Cd27P41272 Gm27702-201ENSMUST00000184512 56 ntBASIC11.8□□□□□ -0.52
Cd27P41272 Gm27494-201ENSMUST00000184735 189 ntBASIC11.8□□□□□ -0.52
Cd27P41272 Gm27397-201ENSMUST00000184997 107 ntBASIC11.8□□□□□ -0.52
Cd27P41272 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd27P41272 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.8□□□□□ -0.52
Cd27P41272 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Cd27P41272 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd27P41272 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd27P41272 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms