Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd9P40240 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd9P40240 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cd9P40240 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd9P40240 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd9P40240 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd9P40240 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cd9P40240 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cd9P40240 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd9P40240 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.52□□□□□ -0.09
Cd9P40240 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.52□□□□□ -0.09
Cd9P40240 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.52□□□□□ -0.09
Cd9P40240 Gm15483-201ENSMUST00000120338 456 ntBASIC14.52□□□□□ -0.09
Cd9P40240 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cd9P40240 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.52□□□□□ -0.09
Cd9P40240 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.52□□□□□ -0.09
Cd9P40240 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Cd9P40240 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd9P40240 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cd9P40240 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.51□□□□□ -0.09
Cd9P40240 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cd9P40240 Gm15467-201ENSMUST00000120582 445 ntBASIC14.51□□□□□ -0.09
Cd9P40240 Gm12260-201ENSMUST00000122447 411 ntBASIC14.51□□□□□ -0.09
Cd9P40240 Gm10275-202ENSMUST00000168697 495 ntBASIC14.51□□□□□ -0.09
Cd9P40240 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cd9P40240 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Gm10275-201ENSMUST00000092620 635 ntBASIC14.51□□□□□ -0.09
Cd9P40240 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.51□□□□□ -0.09
Cd9P40240 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd9P40240 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd9P40240 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.5□□□□□ -0.09
Cd9P40240 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Gm6973-201ENSMUST00000117080 721 ntBASIC14.5□□□□□ -0.09
Cd9P40240 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.5□□□□□ -0.09
Cd9P40240 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Gm18737-201ENSMUST00000173594 937 ntBASIC14.5□□□□□ -0.09
Cd9P40240 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Gm27920-201ENSMUST00000183953 96 ntBASIC14.5□□□□□ -0.09
Cd9P40240 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd9P40240 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd9P40240 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd9P40240 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms