Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Timp3P39876 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Timp3P39876 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.12□□□□□ -0.47
Timp3P39876 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Timp3P39876 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.11□□□□□ -0.47
Timp3P39876 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.11□□□□□ -0.47
Timp3P39876 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Timp3P39876 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.11□□□□□ -0.47
Timp3P39876 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Gm14701-201ENSMUST00000117156 348 ntBASIC12.11□□□□□ -0.47
Timp3P39876 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.11□□□□□ -0.47
Timp3P39876 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.11□□□□□ -0.47
Timp3P39876 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.11□□□□□ -0.47
Timp3P39876 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.11□□□□□ -0.47
Timp3P39876 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.11□□□□□ -0.47
Timp3P39876 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timp3P39876 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Timp3P39876 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.1□□□□□ -0.47
Timp3P39876 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.1□□□□□ -0.47
Timp3P39876 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.1□□□□□ -0.47
Timp3P39876 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.1□□□□□ -0.47
Timp3P39876 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.1□□□□□ -0.47
Timp3P39876 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Timp3P39876 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Timp3P39876 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.1□□□□□ -0.47
Timp3P39876 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timp3P39876 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Timp3P39876 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Timp3P39876 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.09□□□□□ -0.47
Timp3P39876 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Timp3P39876 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timp3P39876 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Timp3P39876 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.09□□□□□ -0.47
Timp3P39876 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms