Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Col2a1P28481 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Gm12490-201ENSMUST00000120255 560 ntBASIC16.56■□□□□ 0.24
Col2a1P28481 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.56■□□□□ 0.24
Col2a1P28481 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.56■□□□□ 0.24
Col2a1P28481 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Col2a1P28481 Gm8515-201ENSMUST00000194852 576 ntBASIC16.56■□□□□ 0.24
Col2a1P28481 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Gm45668-201ENSMUST00000211271 493 ntBASIC16.56■□□□□ 0.24
Col2a1P28481 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col2a1P28481 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col2a1P28481 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Col2a1P28481 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col2a1P28481 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col2a1P28481 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.55■□□□□ 0.24
Col2a1P28481 Gm5745-201ENSMUST00000183748 313 ntBASIC16.55■□□□□ 0.24
Col2a1P28481 Gm9794-201ENSMUST00000202370 423 ntBASIC16.55■□□□□ 0.24
Col2a1P28481 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col2a1P28481 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Col2a1P28481 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.55■□□□□ 0.24
Col2a1P28481 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.55■□□□□ 0.24
Col2a1P28481 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.55■□□□□ 0.24
Col2a1P28481 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col2a1P28481 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Col2a1P28481 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.54■□□□□ 0.24
Col2a1P28481 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col2a1P28481 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.54■□□□□ 0.24
Col2a1P28481 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Gm15823-201ENSMUST00000064305 670 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col2a1P28481 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col2a1P28481 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.54■□□□□ 0.24
Col2a1P28481 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col2a1P28481 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Gm21470-201ENSMUST00000187680 696 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.54■□□□□ 0.24
Col2a1P28481 Gm7653-201ENSMUST00000214567 508 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Gm18624-201ENSMUST00000220966 658 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col2a1P28481 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col2a1P28481 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.54■□□□□ 0.24
Col2a1P28481 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.54■□□□□ 0.24
Col2a1P28481 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Carlr-201ENSMUST00000181515 2574 ntBASIC16.53■□□□□ 0.24
Col2a1P28481 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.53■□□□□ 0.24
Col2a1P28481 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col2a1P28481 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col2a1P28481 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col2a1P28481 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms