Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl1P12850 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.23□□□□□ -0.45
Cxcl1P12850 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.23□□□□□ -0.45
Cxcl1P12850 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.23□□□□□ -0.45
Cxcl1P12850 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcl1P12850 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.23□□□□□ -0.45
Cxcl1P12850 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.23□□□□□ -0.45
Cxcl1P12850 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl1P12850 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Gm7284-201ENSMUST00000131667 944 ntBASIC12.22□□□□□ -0.45
Cxcl1P12850 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Cxcl1P12850 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cxcl1P12850 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cxcl1P12850 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.21□□□□□ -0.45
Cxcl1P12850 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cxcl1P12850 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.21□□□□□ -0.45
Cxcl1P12850 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.21□□□□□ -0.45
Cxcl1P12850 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.21□□□□□ -0.45
Cxcl1P12850 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl1P12850 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.21□□□□□ -0.45
Cxcl1P12850 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.21□□□□□ -0.45
Cxcl1P12850 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.21□□□□□ -0.45
Cxcl1P12850 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms