Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.18■□□□□ 0.66
Apaf1O88879 Gm29541-201ENSMUST00000191351 678 ntBASIC19.18■□□□□ 0.66
Apaf1O88879 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.18■□□□□ 0.66
Apaf1O88879 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.18■□□□□ 0.66
Apaf1O88879 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.18■□□□□ 0.66
Apaf1O88879 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.18■□□□□ 0.66
Apaf1O88879 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Apaf1O88879 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.17■□□□□ 0.66
Apaf1O88879 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.17■□□□□ 0.66
Apaf1O88879 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Apaf1O88879 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.17■□□□□ 0.66
Apaf1O88879 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Apaf1O88879 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Apaf1O88879 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.16■□□□□ 0.66
Apaf1O88879 Gm18737-201ENSMUST00000173594 937 ntBASIC19.16■□□□□ 0.66
Apaf1O88879 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.16■□□□□ 0.66
Apaf1O88879 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.16■□□□□ 0.66
Apaf1O88879 Gm45098-201ENSMUST00000207179 657 ntBASIC19.16■□□□□ 0.66
Apaf1O88879 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Apaf1O88879 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.16■□□□□ 0.66
Apaf1O88879 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.16■□□□□ 0.66
Apaf1O88879 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.16■□□□□ 0.66
Apaf1O88879 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Apaf1O88879 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Gm24158-201ENSMUST00000175263 71 ntBASIC19.15■□□□□ 0.66
Apaf1O88879 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.15■□□□□ 0.66
Apaf1O88879 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Gm7774-201ENSMUST00000200064 533 ntBASIC19.15■□□□□ 0.66
Apaf1O88879 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Apaf1O88879 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Apaf1O88879 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Apaf1O88879 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Apaf1O88879 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Apaf1O88879 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Apaf1O88879 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Apaf1O88879 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Apaf1O88879 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Apaf1O88879 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Apaf1O88879 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Apaf1O88879 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apaf1O88879 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.14■□□□□ 0.65
Apaf1O88879 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apaf1O88879 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apaf1O88879 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apaf1O88879 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apaf1O88879 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Apaf1O88879 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Apaf1O88879 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Apaf1O88879 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms